SMTL ID : 4ars.1

Hafnia Alvei phytase apo form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: H.115, H.116, Q.118 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.114, A:H.116, A:Q.118, A:Q.118 Water bridges: A:Q.118 GOL.2: 8 residues within 4Å: Chain A: R.262, A.311, S.314, M.319, T.320, W.321, N.329, T.330 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.321, A:N.329 Water bridges: A:T.330 GOL.3: 8 residues within 4Å: Chain A: T.277, H.280, A.281, S.288, R.289, P.290, L.291, I.294 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.280, A:S.288, A:L.291 Water bridges: A:A.281 GOL.4: 3 residues within 4Å: Chain A: R.52, H.55, Q.365 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.365, A:Q.365 GOL.5: 7 residues within 4Å: Chain A: V.130, M.137, N.206, K.207, V.208, I.266, N.270 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.208, A:N.270 Water bridges: A:V.130, A:N.270 GOL.6: 7 residues within 4Å: Chain A: T.320, W.321, T.322, V.377, R.378, L.379, N.380 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.322, A:R.378, A:N.380 Water bridges: A:T.320, A:T.320 GOL.7: 4 residues within 4Å: Chain A: T.358, Q.361, P.373, G.375 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.361 Water bridges: A:S.376, A:S.376

5 x ACT: ACETATE ION(Non-functional Binders)

ACT.8: 4 residues within 4Å: Chain A: M.27, T.28, Q.29, R.32 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:M.27 Salt bridges: A:R.32 ACT.9: 3 residues within 4Å: Chain A: P.264, Y.265, K.268 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.264 Salt bridges: A:K.268 ACT.10: 2 residues within 4Å: Chain A: G.7, N.344 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.344 ACT.11: 3 residues within 4Å: Chain A: R.67, F.68, E.339 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.67, A:F.68 Hydrogen bonds: A:E.339 Salt bridges: A:R.67 ACT.12: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ariza, A. et al., Degradation of Phytate by the 6-Phytase from Hafnia Alvei: A Combined Structural and Solution Study. Plos One (2013)

Release Date

2013-05-08

Peptides

HISTIDINE ACID PHOSPHATASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HISTIDINE ACID PHOSPHATASE