SMTL ID : 4art.1

STRUCTURE OF THE ORF273 PROTEIN FROM THE ACIDIANUS TWO-TAILED VIRUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: E.55, N.56, F.57, Y.58, A.70, S.71 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.56, A:F.57, A:Y.58, A:A.70, A:S.71, A:S.71 GOL.2: 8 residues within 4Å: Chain A: K.118, E.122, I.128, E.131, F.191 Chain B: H.219, N.225, F.228 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:E.122, B:N.225, B:N.225 Water bridges: A:K.118

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: S.112, I.113, S.114 Chain B: R.215 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.112, A:S.112, A:I.113, A:S.114, A:S.114 Salt bridges: B:R.215 SO4.4: 5 residues within 4Å: Chain A: R.215 Chain B: S.112, I.113, S.114, Y.210 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Salt bridges: A:R.215 Hydrogen bonds: B:I.113, B:S.114, B:Y.210 Water bridges: B:S.112 SO4.5: 6 residues within 4Å: Chain B: N.56, F.57, Y.58, P.69, A.70, S.71 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:F.57, B:Y.58, B:A.70, B:S.71, B:S.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Felisberto-Rodrigues, C. et al., Crystal Structure of Atv(Orf273), a New Fold for a Thermo-and Acido-Stable Protein from the Acidianus Two-Tailed Virus. Plos One (2012)

Release Date

2012-10-24

Peptides

STRUCTURAL PROTEIN ORF273: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

STRUCTURAL PROTEIN ORF273