SMTL ID : 4av1.1

Crystal structure of the human PARP-1 DNA binding domain in complex with DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.42, C.45, H.74, C.77 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.42, A:C.45, A:H.74, A:C.77 ZN.2: 4 residues within 4Å: Chain B: C.146, C.149, H.180, C.183 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.146, B:C.149, B:H.180, B:C.183 ZN.3: 4 residues within 4Å: Chain C: C.42, C.45, H.74, C.77 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.42, C:C.45, C:H.74, C:C.77 ZN.4: 4 residues within 4Å: Chain D: C.146, C.149, H.180, C.183 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.146, D:C.149, D:H.180, D:C.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ali, A.A.E. et al., The Zinc-Finger Domains of Parp1 Cooperate to Recognise DNA Strand-Breaks. Nat.Struct.Mol.Biol. (2012)

Release Date

2012-06-13

Peptides

POLY [ADP-RIBOSE] POLYMERASE 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

POLY [ADP-RIBOSE] POLYMERASE 1