SMTL ID : 4avn.1

Thermobifida fusca cellobiohydrolase Cel6B catalytic mutant D226A- S232A cocrystallized with cellobiose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC-BGC-BGC.1: 17 residues within 4Å: Chain A: A.91, D.136, T.143, N.144, H.188, G.190, W.191, W.194, S.196, N.197, N.228, D.255, H.322, P.323, G.324, W.326, R.386 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.226 Water bridges: A:A.91, A:D.136, A:D.136

1 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.2: 11 residues within 4Å: Chain A: W.39, D.41, T.53, Y.82, A.94, K.353, P.354, E.357, K.371, S.401, G.402 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:D.41, A:E.357, A:K.371, A:K.371, A:K.371, A:S.401, A:S.401 Water bridges: A:T.53, A:K.353, A:K.353 Salt bridges: A:K.353

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 2 residues within 4Å: Chain A: D.4, D.281 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.4, A:D.4, A:D.281, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, M. et al., Loop Motions Important to Product Expulsion in the Thermobifida Fusca Glycoside Hydrolase Family 6 Cellobiohydrolase from Structural and Computational Studies. J.Biol.Chem. (2013)

Release Date

2013-06-12

Peptides

CELLOBIOHYDROLASE. GLYCOSYL HYDROLASE FAMILY 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CELLOBIOHYDROLASE. GLYCOSYL HYDROLASE FAMILY 6