SMTL ID : 4avx.1

Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) bound to an IP2 compound at 1.68 A Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

monomer

Ligands

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: D.163, A.164, E.165, F.174, K.180 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.163, A:F.174, A:K.180 EDO.5: 4 residues within 4Å: Chain A: V.103, R.106, N.107 Ligands: EDO.9 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.107 EDO.6: 3 residues within 4Å: Chain A: C.186, P.215, C.216 No protein-ligand interaction detected (PLIP) EDO.7: 5 residues within 4Å: Chain A: K.51, N.55, T.89, E.92, L.93 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.51, A:N.55, A:N.55, A:E.92 EDO.8: 2 residues within 4Å: Chain A: Q.19, N.58 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.19 EDO.9: 6 residues within 4Å: Chain A: R.106, L.110, G.140, H.141, V.142 Ligands: EDO.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.106, A:V.142 EDO.10: 1 residues within 4Å: Chain A: E.218 No protein-ligand interaction detected (PLIP) EDO.11: 3 residues within 4Å: Chain A: T.41, Q.42, Y.45 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.42

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.183, C.186, C.213, C.216 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.183, A:C.186, A:C.213, A:C.216 ZN.3: 4 residues within 4Å: Chain A: C.167, C.170, C.191, C.194 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.167, A:C.170, A:C.191, A:C.194

1 x ITP: PHOSPHORIC ACID MONO-(2,3,4,6-TETRAHYDROXY-5-PHOSPHONOOXY-CYCLOHEXYL) ESTER(Non-covalent)

ITP.4: 7 residues within 4Å: Chain A: W.161, R.179, K.180, H.181, H.182, R.184, R.211 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:H.182, A:H.182 Water bridges: A:K.180, A:K.180, A:H.181, A:R.184, A:R.184, A:R.211, A:R.211 Salt bridges: A:R.179, A:H.181, A:R.184, A:R.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Williams, E. et al., Crystal Structure of the Tandem Vhs and Fyve Domains of Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) Bound to an Ip2 Compound at 1.68 A Resolution. To be Published

Release Date

2012-06-13

Peptides

HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE

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