SMTL ID : 4awd.1 (1 other biounit)

Crystal structure of the beta-porphyranase BpGH16B (BACPLE_01689) from the human gut bacterium Bacteroides plebeius

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: E.57, N.59, G.94, D.312 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.57, A:G.94, A:D.312, A:D.312, H2O.2

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: W.75, R.79, T.150, W.152, E.176, D.178, E.181, H.208, E.287 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.79, A:T.150, A:T.150, A:H.208 Water bridges: A:E.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hehemann, J.H. et al., Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes. Proc. Natl. Acad. Sci. U.S.A. (2012)

Release Date

2012-07-25

Peptides

BETA-PORPHYRANASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-PORPHYRANASE

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