SMTL ID : 4ay1.3 (11 other biounits)

Human YKL-39 is a pseudo-chitinase with retained chitooligosaccharide binding properties

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-NAG-NAG.1: 20 residues within 4Å: Chain A: Y.7, W.11, F.38, G.78, Y.79, L.80, S.118, I.120, Y.121, G.162, L.185, F.187, D.188, F.189, W.193, Y.218, Y.244, F.276, W.335, M.339 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.244, A:F.276 Hydrogen bonds: A:Y.79, A:L.80 Water bridges: A:G.78, A:F.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schimpl, M. et al., Human Ykl-39 is a Pseudo-Chitinase with Retained Chitooligosaccharide-Binding Properties. Biochem.J. (2012)

Release Date

2012-08-08

Peptides

CHITINASE-3-LIKE PROTEIN 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

CHITINASE-3-LIKE PROTEIN 2

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