SMTL ID : 4ayw.1

STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (PLATE FORM)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 11 residues within 4Å: Chain A: D.145, Y.382, A.384, S.410, G.411, S.412, G.413, K.414, S.415, T.416, Y.425 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.145, A:G.411, A:S.412, A:G.413, A:K.414, A:S.415, A:T.416 pi-Stacking: A:Y.382, A:Y.382 ANP.4: 11 residues within 4Å: Chain B: D.145, Y.382, A.384, S.410, G.411, S.412, G.413, K.414, S.415, T.416, Y.425 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:D.145, B:G.411, B:S.412, B:G.413, B:K.414, B:S.415, B:T.416 pi-Stacking: B:Y.382, B:Y.382

2 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)

LMT.2: 3 residues within 4Å: Chain A: K.297, L.300, L.301 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.297, A:L.300 Salt bridges: A:K.297, A:K.297 LMT.5: 3 residues within 4Å: Chain B: K.297, L.300, L.301 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.297, B:L.300 Salt bridges: B:K.297, B:K.297

2 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)

Y01.3: 14 residues within 4Å: Chain A: R.51, L.104, A.108, A.111, I.112, Y.115, L.116, R.123 Chain B: R.270, F.274, A.277, G.278, A.282, L.285 11 PLIP interactions: 7 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:L.104, A:A.108, A:A.111, A:I.112, B:F.274, B:A.282, B:L.285 Hydrogen bonds: A:Y.115, A:R.123 Salt bridges: A:R.51, B:R.270 Y01.6: 14 residues within 4Å: Chain A: R.270, F.274, A.277, G.278, A.282, L.285 Chain B: R.51, L.104, A.108, A.111, I.112, Y.115, L.116, R.123 11 PLIP interactions: 7 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:L.104, B:A.108, B:A.111, B:I.112, A:F.274, A:A.282, A:L.285 Hydrogen bonds: B:Y.115, B:R.123 Salt bridges: B:R.51, A:R.270

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shintre, C.A. et al., Structures of Abcb10, a Human ATP-Binding Cassette Transporter in Apo- and Nucleotide-Bound States. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2012-07-11

Peptides

ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Membrane

We predict this structure to be a membrane protein.
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ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10

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