SMTL ID : 4azf.1

Human DYRK2 in complex with Leucettine L41

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x 3RA: 5-(1,3-benzodioxol-5-ylmethyl)-2-(phenylamino)-4H-imidazol-4-one(Non-covalent)

3RA.1: 13 residues within 4Å: Chain A: I.105, G.106, F.110, V.113, A.126, K.128, F.178, E.179, L.180, L.181, L.232, I.244, D.245 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.110, A:A.126, A:F.178, A:L.232, A:I.244 Hydrogen bonds: A:K.128, A:L.181, A:D.245, A:D.245 Water bridges: A:D.245

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: R.361, K.363 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.361, A:K.363 Water bridges: A:R.361

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 4 residues within 4Å: Chain A: H.6, H.7, K.115, H.124 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:H.7 Water bridges: A:K.115, A:K.115 Salt bridges: A:H.6, A:H.7, A:K.115, A:H.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tahtouh, T. et al., Selectivity, Co-Crystal Structures and Neuroprotective Properties of Leucettines, a Family of Protein Kinase Inhibitors Derived from the Marine Sponge Alkaloid Leucettamine B. J.Med.Chem. (2012)

Release Date

2012-09-05

Peptides

DYRK2 DUAL-SPECIFICITY TYROSINE-PHOSPHORYLATION REGULATED KINASE 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DYRK2 DUAL-SPECIFICITY TYROSINE-PHOSPHORYLATION REGULATED KINASE 2