SMTL ID : 4b3n.1 (1 other biounit)

Crystal structure of rhesus TRIM5alpha PRY/SPRY domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 14 residues within 4Å: Chain A: N.26, D.28, K.29, W.76, A.77, D.79, R.80, E.125, E.167, P.168, Y.169, F.170, W.244, W.354 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.76, A:R.80, A:R.80, A:Y.169

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Covalent)

MES.2: 8 residues within 4Å: Chain A: S.543, V.544, I.545, I.546, N.566, N.569, L.573, I.574 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.566

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, H. et al., Structural Insight Into HIV-1 Capsid Recognition by Rhesus Trim5Alpha. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-10-24

Peptides

MALTOSE-BINDING PERIPLASMIC PROTEIN, TRIPARTITE MOTIF-CONTAINING PROTEIN 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MALTOSE-BINDING PERIPLASMIC PROTEIN, TRIPARTITE MOTIF-CONTAINING PROTEIN 5

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