SMTL ID : 4b79.1

THE AEROPATH PROJECT AND PSEUDOMONAS AERUGINOSA HIGH-THROUGHPUT CRYSTALLOGRAPHIC STUDIES FOR ASSESSMENT OF POTENTIAL TARGETS IN EARLY STAGE DRUG DISCOVERY.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 25 residues within 4Å: Chain A: G.18, G.19, S.20, S.21, G.22, I.23, G.42, L.43, L.61, D.62, I.63, N.85, A.86, G.87, I.88, L.106, I.132, A.133, Y.147, K.151, P.177, G.178, W.179, I.180, T.182 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:P.177 Hydrogen bonds: A:G.18, A:S.20, A:S.21, A:S.21, A:I.23, A:L.43, A:L.43, A:D.62, A:I.63, A:N.85, A:G.87, A:K.151, A:I.180, A:I.180, A:T.182, A:T.182 Water bridges: A:G.24, A:N.85 NAD.2: 25 residues within 4Å: Chain B: G.18, G.19, S.20, S.21, G.22, I.23, G.42, L.43, L.61, D.62, I.63, N.85, A.86, G.87, I.88, L.106, I.132, A.133, Y.147, K.151, P.177, G.178, W.179, I.180, T.182 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:P.177 Hydrogen bonds: B:G.18, B:S.20, B:S.21, B:S.21, B:I.23, B:L.43, B:L.43, B:D.62, B:D.62, B:I.63, B:N.85, B:G.87, B:K.151, B:I.180, B:I.180, B:T.182 Water bridges: B:G.24, B:N.85 NAD.3: 25 residues within 4Å: Chain C: G.18, G.19, S.20, S.21, G.22, I.23, G.42, L.43, L.61, D.62, I.63, N.85, A.86, G.87, I.88, L.106, I.132, A.133, Y.147, K.151, P.177, G.178, W.179, I.180, T.182 20 PLIP interactions: 20 interactions with chain C Hydrophobic interactions: C:P.177 Hydrogen bonds: C:G.18, C:S.20, C:S.21, C:S.21, C:I.23, C:L.43, C:L.43, C:D.62, C:D.62, C:I.63, C:N.85, C:G.87, C:Y.147, C:K.151, C:I.180, C:I.180, C:T.182 Water bridges: C:G.24, C:N.85 NAD.4: 25 residues within 4Å: Chain D: G.18, G.19, S.20, S.21, G.22, I.23, G.42, L.43, L.61, D.62, I.63, N.85, A.86, G.87, I.88, L.106, I.132, A.133, Y.147, K.151, P.177, G.178, W.179, I.180, T.182 20 PLIP interactions: 20 interactions with chain D Hydrophobic interactions: D:P.177 Hydrogen bonds: D:G.18, D:S.20, D:S.21, D:S.21, D:I.23, D:L.43, D:L.43, D:D.62, D:I.63, D:N.85, D:G.87, D:Y.147, D:K.151, D:I.180, D:I.180, D:T.182, D:T.182 Water bridges: D:G.24, D:N.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moynie, L. et al., The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery. Acta Crystallogr.,Sect.F (2013)

Release Date

2012-08-29

Peptides

PROBABLE SHORT-CHAIN DEHYDROGENASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

PROBABLE SHORT-CHAIN DEHYDROGENASE

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