- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PXG: 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID(Non-covalent)
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
PLP.2: 8 residues within 4Å:- Chain A: M.196, V.239, G.240, Y.241, L.242, Q.243, F.277, G.278
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:G.240, A:G.240, A:L.242, A:Q.243, A:F.277
- Water bridges: A:Y.241, A:Y.241
PLP.6: 8 residues within 4Å:- Chain B: M.196, V.239, G.240, Y.241, L.242, Q.243, F.277, G.278
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:G.240, B:G.240, B:L.242, B:Q.243, B:F.277
- Water bridges: B:Y.241, B:Y.241, B:Q.243
PLP.10: 8 residues within 4Å:- Chain C: M.196, V.239, G.240, Y.241, L.242, Q.243, F.277, G.278
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:G.240, C:L.242, C:Q.243
- Water bridges: C:Y.241, C:Y.241
PLP.13: 8 residues within 4Å:- Chain D: M.196, V.239, G.240, Y.241, L.242, Q.243, F.277, G.278
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:G.240, D:L.242, D:Q.243
- Water bridges: D:Y.241, D:Y.241, D:Q.243
- 2 x CA: CALCIUM ION(Non-covalent)
CA.3: 2 residues within 4Å:- Chain A: D.180
- Chain D: D.180
6 PLIP interactions:1 interactions with chain D, 1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: D:D.180, A:D.180, H2O.9, H2O.9, H2O.9, H2O.16
CA.7: 2 residues within 4Å:- Chain B: D.180
- Chain C: D.180
6 PLIP interactions:1 interactions with chain B, 1 interactions with chain C, 4 Ligand-Water interactions- Metal complexes: B:D.180, C:D.180, H2O.23, H2O.23, H2O.23, H2O.30
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.4: 4 residues within 4Å:- Chain A: F.322, S.323
- Chain B: M.172, F.173
Ligand excluded by PLIPCL.8: 4 residues within 4Å:- Chain A: M.172, F.173
- Chain B: F.322, S.323
Ligand excluded by PLIPCL.11: 4 residues within 4Å:- Chain C: F.322, S.323
- Chain D: M.172, F.173
Ligand excluded by PLIPCL.14: 4 residues within 4Å:- Chain C: M.172, F.173
- Chain D: F.322, S.323
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sayer, C. et al., Structural Studies with Pseudomonas and Chromobacterium [Omega]-Aminotransferases Provide Insights Into Their Differing Substrate Specificity. Acta Crystallogr.,Sect.D (2013)
- Release Date
- 2013-03-27
- Peptides
- BETA-ALANINE--PYRUVATE TRANSAMINASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PXG: 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID(Non-covalent)
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
- 2 x CA: CALCIUM ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sayer, C. et al., Structural Studies with Pseudomonas and Chromobacterium [Omega]-Aminotransferases Provide Insights Into Their Differing Substrate Specificity. Acta Crystallogr.,Sect.D (2013)
- Release Date
- 2013-03-27
- Peptides
- BETA-ALANINE--PYRUVATE TRANSAMINASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D