SMTL ID : 4b9a.1

Structure of a putative epoxide hydrolase from Pseudomonas aeruginosa.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

24 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.200 Ligand excluded by PLIP SO4.2: 3 residues within 4Å: Chain A: H.48, R.49, H.191 Ligand excluded by PLIP SO4.3: 5 residues within 4Å: Chain A: P.239, H.296, R.297, E.298, A.299 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: D.280, A.281, P.282, D.283, A.284 Ligand excluded by PLIP SO4.5: 5 residues within 4Å: Chain A: D.120, H.121, P.122, Q.123, A.124 Ligand excluded by PLIP SO4.6: 2 residues within 4Å: Chain A: R.235, Q.237 Ligand excluded by PLIP SO4.7: 5 residues within 4Å: Chain A: A.20, R.66, D.80, A.85, R.88 Ligand excluded by PLIP SO4.8: 5 residues within 4Å: Chain A: T.132, Q.245, R.247, Y.249, H.275 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain A: D.177, R.181, Y.190, L.195, R.199 Ligand excluded by PLIP SO4.10: 1 residues within 4Å: Chain A: R.199 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain A: R.230, T.261, W.262 Ligand excluded by PLIP SO4.12: 7 residues within 4Å: Chain A: D.108, R.109, R.112, T.132, V.133, W.154, H.275 Ligand excluded by PLIP SO4.17: 1 residues within 4Å: Chain B: R.200 Ligand excluded by PLIP SO4.18: 3 residues within 4Å: Chain B: H.48, R.49, H.191 Ligand excluded by PLIP SO4.19: 5 residues within 4Å: Chain B: P.239, H.296, R.297, E.298, A.299 Ligand excluded by PLIP SO4.20: 5 residues within 4Å: Chain B: D.280, A.281, P.282, D.283, A.284 Ligand excluded by PLIP SO4.21: 5 residues within 4Å: Chain B: D.120, H.121, P.122, Q.123, A.124 Ligand excluded by PLIP SO4.22: 2 residues within 4Å: Chain B: R.235, Q.237 Ligand excluded by PLIP SO4.23: 5 residues within 4Å: Chain B: A.20, R.66, D.80, A.85, R.88 Ligand excluded by PLIP SO4.24: 5 residues within 4Å: Chain B: T.132, Q.245, R.247, Y.249, H.275 Ligand excluded by PLIP SO4.25: 5 residues within 4Å: Chain B: D.177, R.181, Y.190, L.195, R.199 Ligand excluded by PLIP SO4.26: 1 residues within 4Å: Chain B: R.199 Ligand excluded by PLIP SO4.27: 3 residues within 4Å: Chain B: R.230, T.261, W.262 Ligand excluded by PLIP SO4.28: 7 residues within 4Å: Chain B: D.108, R.109, R.112, T.132, V.133, W.154, H.275 Ligand excluded by PLIP

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.13: 6 residues within 4Å: Chain A: P.33, G.98, F.99, E.100, R.101, L.300 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.98, A:E.100, A:R.101, A:L.300 GOL.14: 4 residues within 4Å: Chain A: Y.13, R.24, H.44, E.70 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.24, A:E.70 GOL.15: 2 residues within 4Å: Chain B: K.145, V.146 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:K.145 Water bridges: B:K.145, A:D.224 GOL.16: 2 residues within 4Å: Chain A: A.141 Chain B: N.144 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Water bridges: A:W.140, A:W.140, B:K.145 GOL.29: 6 residues within 4Å: Chain B: P.33, G.98, F.99, E.100, R.101, L.300 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.98, B:E.100, B:R.101, B:L.300 GOL.30: 4 residues within 4Å: Chain B: Y.13, R.24, H.44, E.70 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.24, B:E.70 GOL.31: 2 residues within 4Å: Chain A: K.145, V.146 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Water bridges: B:D.224, A:K.145 Hydrogen bonds: A:K.145 GOL.32: 2 residues within 4Å: Chain A: N.144 Chain B: A.141 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Water bridges: B:W.140, B:W.140, A:K.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moynie, L. et al., The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery. Acta Crystallogr.,Sect.F (2013)

Release Date

2013-02-06

Peptides

PROBABLE EPOXIDE HYDROLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROBABLE EPOXIDE HYDROLASE

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