- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 2 x OXL: OXALATE ION(Non-covalent)
OXL.11: 4 residues within 4Å:- Chain A: H.731, S.764, R.798, K.817
11 PLIP interactions:11 interactions with chain A- Water bridges: A:H.731, A:H.731, A:D.765, A:D.765, A:Y.767, A:R.798, A:K.817
- Salt bridges: A:H.731, A:R.798, A:K.817, A:K.817
OXL.29: 4 residues within 4Å:- Chain B: H.731, S.764, R.798, K.817
11 PLIP interactions:11 interactions with chain B- Water bridges: B:H.731, B:H.731, B:D.765, B:D.765, B:Y.767, B:R.798, B:K.817
- Salt bridges: B:H.731, B:R.798, B:K.817, B:K.817
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.12: 6 residues within 4Å:- Chain A: Q.77, L.78, S.229, G.230, R.231, T.432
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:L.78, A:G.230
EDO.13: 4 residues within 4Å:- Chain A: D.683, Y.684, R.685
- Ligands: EDO.31
No protein-ligand interaction detected (PLIP)EDO.14: 3 residues within 4Å:- Chain A: R.561, P.562, K.565
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.565
- Water bridges: A:P.562
EDO.15: 4 residues within 4Å:- Chain A: R.753, G.807, R.808, E.809
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.753, A:R.808, A:R.808
EDO.17: 4 residues within 4Å:- Chain A: H.178, H.184, S.185, G.186
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:H.184, A:G.186, A:Q.187
EDO.18: 2 residues within 4Å:- Chain A: T.743, G.744
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.744
EDO.30: 6 residues within 4Å:- Chain B: Q.77, L.78, S.229, G.230, R.231, T.432
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:L.78, B:G.230
EDO.31: 4 residues within 4Å:- Chain B: D.683, Y.684, R.685
- Ligands: EDO.13
No protein-ligand interaction detected (PLIP)EDO.32: 3 residues within 4Å:- Chain B: R.561, P.562, K.565
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.565
- Water bridges: B:P.562
EDO.33: 4 residues within 4Å:- Chain B: R.753, G.807, R.808, E.809
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.753, B:R.808, B:R.808
EDO.35: 4 residues within 4Å:- Chain B: H.178, H.184, S.185, G.186
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:H.184, B:G.186, B:Q.187
EDO.36: 2 residues within 4Å:- Chain B: T.743, G.744
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.744
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Larsbrink, J. et al., Structural Enzymology of Cellvibrio Japonicus Agd31B Reveals Alpha-Transglucosylase Activity in Glycoside Hydrolase Family 31. J.Biol.Chem. (2012)
- Release Date
- 2012-11-14
- Peptides
- ALPHA-GLUCOSIDASE, PUTATIVE, ADG31B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 2 x OXL: OXALATE ION(Non-covalent)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Larsbrink, J. et al., Structural Enzymology of Cellvibrio Japonicus Agd31B Reveals Alpha-Transglucosylase Activity in Glycoside Hydrolase Family 31. J.Biol.Chem. (2012)
- Release Date
- 2012-11-14
- Peptides
- ALPHA-GLUCOSIDASE, PUTATIVE, ADG31B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A