SMTL ID : 4bcm.1 (1 other biounit)

Structure of CDK2 in complex with cyclin A and a 2-amino-4-heteroaryl- pyrimidine inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

hetero-1-1-mer

Ligands

1 x T7Z: 4-(4-methyl-2-methylimino-3H-1,3-thiazol-5-yl)-2-[(4-methyl-3-morpholin-4-ylsulfonyl-phenyl)amino]pyrimidine-5-carbonitrile(Non-covalent)

T7Z.1: 15 residues within 4Å: Chain A: I.13, G.14, E.15, V.21, A.34, V.67, F.83, E.84, F.85, L.86, H.87, Q.88, D.89, K.92, L.137 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.13, A:I.13, A:A.34, A:F.83, A:F.85, A:L.137 Hydrogen bonds: A:L.86, A:L.86, A:D.89, A:K.92 Salt bridges: A:D.89

1 x SGM: MONOTHIOGLYCEROL(Non-covalent)

SGM.2: 4 residues within 4Å: Chain B: M.19, C.23, R.71, D.135 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.22, B:D.135 Water bridges: B:R.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hole, A.J. et al., Comparative Structural and Functional Studies of 4-(Thiazol- 5-Yl)-2-(Phenylamino)Pyrimidine-5-Carbonitrile Cdk9 Inhibitors Suggest the Basis for Isotype Selectivity. J.Med.Chem. (2013)

Release Date

2013-03-06

Peptides

CYCLIN-DEPENDENT KINASE 2: A
CYCLIN-A2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CYCLIN-DEPENDENT KINASE 2

CYCLIN-A2

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