SMTL ID : 4bd8.1 (1 other biounit)

Bax domain swapped dimer induced by BimBH3 with CHAPS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

homo-dimer

Ligands

2 x PR: PRASEODYMIUM ION(Non-covalent)

PR.1: 2 residues within 4Å: Chain A: D.142, E.146 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.142, A:D.142, H2O.3 PR.7: 2 residues within 4Å: Chain B: D.142, E.146 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.142, B:D.142, B:E.146, B:E.146

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: N.73, M.74, E.75 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.72, A:M.74, A:E.75, A:E.75, A:E.75 EDO.3: 4 residues within 4Å: Chain A: P.168, T.169 Chain B: N.106, R.109 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.106, B:R.109, A:T.169 EDO.4: 3 residues within 4Å: Chain A: S.15, S.16 Chain B: Q.153 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.16 EDO.5: 4 residues within 4Å: Chain A: S.87, P.88, R.89, E.90 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.87, A:R.89, A:E.90 EDO.6: 3 residues within 4Å: Chain A: E.131, R.134, T.135 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.134, A:T.135 EDO.8: 2 residues within 4Å: Chain B: Q.52, D.53 No protein-ligand interaction detected (PLIP) EDO.9: 1 residues within 4Å: Chain B: Q.52 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czabotar, P.E. et al., Bax Crystal Structures Reveal How Bh3 Domains Activate Bax and Nucleate its Oligomerization to Induce Apoptosis. Cell(Cambridge,Mass.) (2013)

Release Date

2013-02-13

Peptides

APOPTOSIS REGULATOR BAX: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

APOPTOSIS REGULATOR BAX

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