SMTL ID : 4bgi.1 (2 other biounits)

Crystal structure of InhA(S94A) mutant in complex with OH-141

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

homo-tetramer

Ligands

3 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 21 residues within 4Å: Chain A: G.18, I.20, S.24, F.45, L.67, D.68, V.69, Q.70, A.98, I.99, G.100, I.126, M.151, D.152, F.153, M.165, K.169, A.195, G.196, P.197, I.198 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.153, A:A.195 Hydrogen bonds: A:G.18, A:D.68, A:V.69, A:Q.70, A:I.99, A:G.100, A:K.169, A:I.198, A:I.198 Water bridges: A:I.99, A:Y.162 pi-Stacking: A:F.45, A:F.45 NAD.2: 21 residues within 4Å: Chain B: G.18, I.20, S.24, I.25, F.45, L.67, D.68, V.69, A.98, I.99, G.100, I.126, M.151, D.152, F.153, M.165, K.169, A.195, G.196, P.197, I.198 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:F.153, B:A.195 Hydrogen bonds: B:G.18, B:G.18, B:I.25, B:D.68, B:V.69, B:I.99, B:G.100, B:K.169, B:I.198, B:I.198 Water bridges: B:A.26, B:I.99 pi-Stacking: B:F.45 NAD.3: 22 residues within 4Å: Chain C: G.18, I.20, S.24, I.25, A.26, F.45, L.67, D.68, V.69, A.98, I.99, G.100, I.126, M.151, D.152, F.153, M.165, K.169, A.195, G.196, P.197, I.198 16 PLIP interactions: 16 interactions with chain C Hydrophobic interactions: C:F.153, C:A.195 Hydrogen bonds: C:G.18, C:G.18, C:S.24, C:I.25, C:A.26, C:D.68, C:D.68, C:V.69, C:I.99, C:G.100, C:K.169, C:I.198, C:I.198 Water bridges: C:Y.162

1 x I4I: 3-hydroxy-N-[(2R,5R,6S,9S,10S,11R)-10-hydroxy-5,11-dimethyl-3,7,12-trioxo-2-(propan-2-yl)-9-(pyridin-3-ylmethyl)-1,4-dioxa-8-azacyclododecan-6-yl]pyridine-2-carboxamide(Non-covalent)

I4I.4: 17 residues within 4Å: Chain D: I.25, A.98, I.99, G.100, M.107, M.151, D.152, F.153, Y.162, M.165, K.169, A.195, G.196, P.197, I.198, M.203, L.222 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:I.25, D:M.151, D:F.153, D:F.153, D:F.153, D:Y.162, D:Y.162, D:L.222 Hydrogen bonds: D:Y.162, D:K.169, D:K.169, D:I.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hartkoorn, R.C. et al., Pyridomycin bridges the NADH- and substrate-binding pockets of the enoyl reductase InhA. Nat. Chem. Biol. (2014)

Release Date

2013-12-04

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADH]: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
E

D
F

Enoyl-[acyl-carrier-protein] reductase [NADH]

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