SMTL ID : 4bj3.1

Integrin alpha2 I domain E318W-collagen complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.04 Å

Oligo State

hetero-2-3-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: S.33, S.35, T.101, E.136 Chain E: E.11 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain E Metal complexes: A:S.33, A:S.35, A:T.101, E:E.11 MG.4: 6 residues within 4Å: Chain B: D.31, S.33, S.35, T.101, E.136 Chain C: E.11 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain C Metal complexes: B:S.33, B:S.35, B:T.101, C:E.11

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: G.164, Y.165, L.166, N.167, R.168 Ligand excluded by PLIP

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.3: 5 residues within 4Å: Chain C: P.5, P.6, G.7, F.8 Chain E: P.3 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:P.3, E:P.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carafoli, F. et al., An Activating Mutation Reveals a Second Binding Mode of the Integrin Alpha2 I Domain to the Gfoger Motif in Collagens. Plos One (2013)

Release Date

2013-11-20

Peptides

INTEGRIN ALPHA-2: AB
GFOGER PEPTIDE: CDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

INTEGRIN ALPHA-2

GFOGER PEPTIDE