SMTL ID : 4blk.1

Crystal Structure of Fungal Versatile Peroxidase I from Pleurotus ostreatus - Crystal Form I

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: D.49, G.61, D.63, S.65, I.66, S.134 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.49, A:D.63, A:S.65, H2O.4, H2O.4 CA.2: 7 residues within 4Å: Chain A: S.171, D.188, T.190, P.191, V.193, D.195, Q.197 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.188, A:D.188, A:T.190, A:V.193, A:D.195

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.3: 29 residues within 4Å: Chain A: H.40, E.41, L.43, R.44, T.46, F.47, P.140, E.141, P.142, I.149, M.153, V.163, L.166, L.167, S.169, H.170, I.172, A.173, A.174, A.175, D.176, K.177, V.178, F.187, L.229, S.231, F.259, M.263, M.266 29 PLIP interactions: 28 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:L.43, A:L.43, A:R.44, A:F.47, A:F.47, A:F.47, A:F.47, A:P.140, A:P.142, A:I.149, A:L.166, A:L.167, A:A.173, A:A.175, A:V.178, A:F.187, A:F.187, A:L.229 Hydrogen bonds: A:H.40, A:A.174, A:D.176, A:K.177, A:V.178 Water bridges: A:E.41, A:R.44 Salt bridges: A:R.44 pi-Cation interactions: A:R.44 Metal complexes: A:H.170, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fernandez-Fueyo, E. et al., Ligninolytic Peroxidase Genes in the Oyster Mushroom Genome: Heterologous Expression, Molecular Structure, Catalytic and Stability Properties, and Lignin-Degrading Ability. Biotechnol.Biofuels (2014)

Release Date

2014-01-15

Peptides

VERSATILE PEROXIDASE I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

VERSATILE PEROXIDASE I

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