SMTL ID : 4bm7.1 (1 other biounit)

Crystal Structure of IgG Fc F241A mutant with native glycosylation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- NAG- MAN- FUL: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-FUL.1: 13 residues within 4Å: Chain A: S.18, V.19, F.22, K.25, T.39, V.43, D.44, Q.74, Y.75, N.76, T.78, R.80, K.113 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.75 Hydrogen bonds: A:K.113, A:K.25, A:K.25 Water bridges: A:K.113

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: M.31, I.32, S.33 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, X. et al., Engineering Hydrophobic Protein-Carbohydrate Interactions to Fine-Tune Monoclonal Antibodies. J.Am.Chem.Soc. (2013)

Release Date

2013-07-03

Peptides

IG GAMMA-1 CHAIN C REGION: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

IG GAMMA-1 CHAIN C REGION

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