SMTL ID : 4bqc.1 (1 other biounit)

Crystal structure of the FN5 and FN6 domains of NEO1 bound to SOS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x GU4- YYJ: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose(Non-covalent)

GU4-YYJ.1: 6 residues within 4Å: Chain A: T.2, G.3, S.30, R.41, K.86, R.89 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.41, A:T.2, A:G.3, A:G.3 Salt bridges: A:R.41, A:K.86, A:K.86, A:R.89, A:K.86, A:R.89, A:R.89

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: Y.42, N.59, A.60, N.61 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: E.103, K.138, T.140, N.188, S.189 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.138, A:K.138, A:S.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bell, C.H. et al., Structure of the Repulsive Guidance Molecule (Rgm)-Neogenin Signaling Hub. Science (2013)

Release Date

2013-06-12

Peptides

NEOGENIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NEOGENIN

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