SMTL ID : 4bqh.1

Crystal structure of the uridine diphosphate N-acetylglucosamine pyrophosphorylase from Trypanosoma brucei in complex with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: E.513, G.514, L.515, R.516 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.514, A:L.515, A:R.516 Water bridges: A:R.516, A:R.516, A:Q.517 Salt bridges: A:R.516 SO4.3: 4 residues within 4Å: Chain A: H.206, R.249, L.264, H.267 4 PLIP interactions: 4 interactions with chain A Water bridges: A:F.207 Salt bridges: A:H.206, A:R.249, A:H.267

1 x 9VU: (3S)-3-[2-(1,3-benzodioxol-5-yl)-2-oxidanylidene-ethyl]-4-bromanyl-5-methyl-3-oxidanyl-1H-indol-2-one(Non-covalent)

9VU.2: 19 residues within 4Å: Chain A: G.48, V.49, D.50, H.53, F.54, S.211, V.213, G.236, G.237, G.239, A.240, F.242, A.243, A.246, A.371, M.374, K.375, Y.380, A.401 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.54, A:V.213, A:A.240, A:A.246, A:K.375 Hydrogen bonds: A:G.48, A:D.50, A:K.375

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Urbaniak, M.D. et al., A Novel Allosteric Inhibitor of the Uridine Diphosphate N-Acetylglucosamine Pyrophosphorylase from Trypanosoma Brucei. Acs Chem.Biol. (2013)

Release Date

2013-07-17

Peptides

UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE