SMTL ID : 4bs6.1 (1 other biounit)

MOUSE CATHEPSIN S WITH COVALENT LIGAND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: R.15, V.20, T.21, E.22, V.23, K.191, Y.203 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.15, A:V.23 Water bridges: A:Q.201

1 x JG7: (2S,4R)-4-[2-chloranyl-4-(4-ethylpiperazin-1-yl)phenyl]sulfonyl-N-[1-(iminomethyl)cyclopropyl]-1-[1-(trifluoromethyl)cyclopropyl]carbonyl-pyrrolidine-2-carboxamide(Covalent)

JG7.2: 17 residues within 4Å: Chain A: Q.26, G.30, A.31, C.32, W.33, K.72, G.75, G.76, G.77, Y.78, M.79, G.145, V.170, N.171, H.172, G.173, Y.219 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.170 Hydrogen bonds: A:C.32, A:G.77, A:N.171 Water bridges: A:Q.26 pi-Stacking: A:Y.78, A:Y.219 Halogen bonds: A:G.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haap, W. et al., Cathepsin S Nitrile Inhibitors. To be Published

Release Date

2014-06-18

Peptides

CATHEPSIN S: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CATHEPSIN S

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