SMTL ID : 4bvn.1

Ultra-thermostable beta1-adrenoceptor with cyanopindolol bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: D.57, S.98 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.98, A:S.98 NA.2: 4 residues within 4Å: Chain A: C.162, Y.163, D.165, C.168 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:C.168, A:C.168

1 x P32: 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile

P32.3: 16 residues within 4Å: Chain A: W.87, T.88, D.91, V.92, F.171, T.173, Y.177, A.178, S.181, S.185, W.245, F.248, F.249, N.252, N.271, Y.275 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.87, A:T.88, A:V.92, A:F.171 Hydrogen bonds: A:D.91, A:N.252, A:N.271, A:N.271, A:Y.275 pi-Stacking: A:F.249

1 x MHA: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID(Non-covalent)

MHA.4: 3 residues within 4Å: Chain A: G.80, S.81, P.166 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.81 Water bridges: A:F.82

7 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.5: 8 residues within 4Å: Chain A: V.142, P.146, W.151, R.153, N.174, A.176, Y.177, I.184 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.151, A:Y.177 OLC.6: 8 residues within 4Å: Chain A: A.197, Y.201, K.229, K.232, G.235, G.239, T.242 Ligands: OLC.7 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.197, A:Y.201, A:K.232 Hydrogen bonds: A:K.229, A:K.232 Salt bridges: A:K.232 OLC.7: 13 residues within 4Å: Chain A: R.109, A.197, V.200, Y.201, A.204, H.228, K.229, L.231, K.232, L.234, G.235, M.238 Ligands: OLC.6 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:R.109, A:A.197, A:V.200, A:Y.201, A:A.204, A:K.229, A:L.234 OLC.8: 6 residues within 4Å: Chain A: M.18, V.72, K.264, W.265, V.268, W.272 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.72, A:K.264, A:W.265, A:W.272, A:W.272 OLC.9: 6 residues within 4Å: Chain A: I.107, Y.110, R.127, F.195, V.196 Ligands: OLC.10 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.107, A:Y.110, A:F.195, A:V.196 OLC.10: 5 residues within 4Å: Chain A: I.107, D.108, L.111, I.131 Ligands: OLC.9 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.107 Hydrogen bonds: A:D.108 OLC.11: 11 residues within 4Å: Chain A: T.44, L.45, T.46, R.109, A.112, I.113, Y.119, Q.120, E.227, A.230, L.231 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.113, A:Y.119, A:E.227, A:A.230, A:L.231, A:L.231 Hydrogen bonds: A:L.45, A:T.46, A:T.46 Salt bridges: A:R.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miller-Gallacher, J.L. et al., The 2.1 A Resolution Structure of Cyanopindolol-Bound Beta1- Adrenoceptor Identifies an Intramembrane Na+ Ion that Stabilises the Ligand-Free Receptor. Plos One (2014)

Release Date

2014-04-02

Peptides

BETA-1 ADRENERGIC RECEPTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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BETA-1 ADRENERGIC RECEPTOR