SMTL ID : 4bvv.1

Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CPF: 1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID(Non-covalent)

CPF.1: 9 residues within 4Å: Chain A: H.34, S.35, T.36, D.56, D.58, W.63, Y.65, L.72, F.73 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.72 Hydrogen bonds: A:S.35, A:T.36, A:D.58, A:Y.65 pi-Stacking: A:F.37

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: D.1, Y.10, G.12, K.13, K.14 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.10, A:Y.10, A:K.13, A:K.14 Water bridges: A:D.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sandmark, J. et al., Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A). To be Published

Release Date

2014-07-16

Peptides

APOLIPOPROTEIN(A): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

APOLIPOPROTEIN(A)