SMTL ID : 4bvw.2 (1 other biounit)

Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: Y.60, P.61, N.62, G.63 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain A: Y.22, Q.97 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: Y.22, G.24, I.77, Q.97 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.24

1 x HKY: 1,2,3,4-tetrahydroisoquinoline-6-carboxylic acid(Non-covalent)

HKY.4: 7 residues within 4Å: Chain A: R.55, D.74, E.76, W.80, Y.82, R.89, W.90 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.80, A:W.90 Hydrogen bonds: A:E.76, A:E.76, A:Y.82 Water bridges: A:R.55, A:R.55 Salt bridges: A:R.55, A:R.89 pi-Cation interactions: A:R.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sandmark, J. et al., Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A). To be Published

Release Date

2014-07-16

Peptides

APOLIPOPROTEIN(A): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

APOLIPOPROTEIN(A)

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