SMTL ID : 4bvx.1

Crystal structure of the AIMP3-MRS N-terminal domain complex with I3C

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

3 x I3C: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid(Non-covalent)

I3C.1: 3 residues within 4Å: Chain A: R.2, L.29, S.31 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.31 Salt bridges: A:R.2, A:R.2 pi-Cation interactions: A:R.2 I3C.2: 4 residues within 4Å: Chain A: R.25, L.71 Chain B: T.66, A.67 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:R.25, B:A.67 Halogen bonds: A:L.71 Water bridges: B:E.68 Salt bridges: B:K.70 I3C.3: 6 residues within 4Å: Chain B: L.142, R.146, C.149, H.150, K.168, R.170 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:R.146, B:R.146, B:K.168 Salt bridges: B:R.146, B:H.150, B:K.168, B:K.168, B:R.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cho, H.Y. et al., Assembly of Multi-tRNA Synthetase Complex Via Heterotetrameric Glutathione Transferase-Homology Domains. J.Biol.Chem. (2015)

Release Date

2014-07-16

Peptides

METHIONINE--TRNA LIGASE, CYTOPLASMIC: A
EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

METHIONINE--TRNA LIGASE, CYTOPLASMIC

EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1