SMTL ID : 4bwr.1

Crystal structure of c5321: a protective antigen present in uropathogenic Escherichia coli strains displaying an SLR fold

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: H.99, E.136, D.138 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.99, A:E.136, A:D.138, H2O.1, H2O.2, H2O.2

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: R.123 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: Y.272, H.276 Ligands: EDO.18 Ligand excluded by PLIP

29 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 3 residues within 4Å: Chain A: A.249, K.250 Ligands: EDO.19 Ligand excluded by PLIP EDO.5: 5 residues within 4Å: Chain A: Y.278, D.279, K.287, R.289, I.314 Ligand excluded by PLIP EDO.6: 3 residues within 4Å: Chain A: D.143, Y.144, G.175 Ligand excluded by PLIP EDO.7: 3 residues within 4Å: Chain A: K.254, E.257 Ligands: EDO.17 Ligand excluded by PLIP EDO.8: 4 residues within 4Å: Chain A: L.256, G.284, V.285, A.286 Ligand excluded by PLIP EDO.9: 2 residues within 4Å: Chain A: Q.459, S.460 Ligand excluded by PLIP EDO.10: 5 residues within 4Å: Chain A: E.384, Y.387, Y.388, N.418, I.421 Ligand excluded by PLIP EDO.11: 5 residues within 4Å: Chain A: V.96, H.99, F.115, S.129, D.132 Ligand excluded by PLIP EDO.12: 3 residues within 4Å: Chain A: R.188, K.189, T.192 Ligand excluded by PLIP EDO.13: 6 residues within 4Å: Chain A: L.351, Q.381, E.384, Y.388, L.390 Ligands: EDO.31 Ligand excluded by PLIP EDO.14: 4 residues within 4Å: Chain A: S.268, Q.302, G.303, D.304 Ligand excluded by PLIP EDO.15: 4 residues within 4Å: Chain A: Q.127, K.153, Q.157 Ligands: EDO.16 Ligand excluded by PLIP EDO.16: 7 residues within 4Å: Chain A: A.119, E.120, Q.127, W.150, K.153 Ligands: EDO.15, EDO.24 Ligand excluded by PLIP EDO.17: 5 residues within 4Å: Chain A: K.254, E.257, W.258, K.261 Ligands: EDO.7 Ligand excluded by PLIP EDO.18: 6 residues within 4Å: Chain A: Y.240, E.243, Q.244, Y.273, H.276 Ligands: CL.3 Ligand excluded by PLIP EDO.19: 3 residues within 4Å: Chain A: G.248, A.249 Ligands: EDO.4 Ligand excluded by PLIP EDO.20: 3 residues within 4Å: Chain A: D.107, K.108, A.109 Ligand excluded by PLIP EDO.21: 4 residues within 4Å: Chain A: K.326, E.329, W.330, K.333 Ligand excluded by PLIP EDO.22: 4 residues within 4Å: Chain A: K.250, P.252, A.282, E.283 Ligand excluded by PLIP EDO.23: 4 residues within 4Å: Chain A: M.411, N.412, L.413, F.414 Ligand excluded by PLIP EDO.24: 5 residues within 4Å: Chain A: M.146, E.149, W.150, K.153 Ligands: EDO.16 Ligand excluded by PLIP EDO.25: 2 residues within 4Å: Chain A: R.452, K.455 Ligand excluded by PLIP EDO.26: 2 residues within 4Å: Chain A: S.232, N.267 Ligand excluded by PLIP EDO.27: 5 residues within 4Å: Chain A: Y.207, F.208, R.237, Y.240, Y.273 Ligand excluded by PLIP EDO.28: 3 residues within 4Å: Chain A: R.178, N.179, D.180 Ligand excluded by PLIP EDO.29: 4 residues within 4Å: Chain A: D.71, A.73, Q.74, I.77 Ligand excluded by PLIP EDO.30: 3 residues within 4Å: Chain A: R.220, S.224, L.238 Ligand excluded by PLIP EDO.31: 2 residues within 4Å: Chain A: Q.352 Ligands: EDO.13 Ligand excluded by PLIP EDO.32: 3 residues within 4Å: Chain A: D.395, V.397, Q.398 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Urosev, D. et al., Crystal Structure of C5321: A Protective Antigen Present in Uropathogenic Escherichia Coli Strains Displaying an Slr Fold. Bmc Struct.Biol. (2013)

Release Date

2013-07-24

Peptides

PROTEIN CORRESPONDING TO LOCUS C5321 FROM CFT073 E.COLI STRAIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN CORRESPONDING TO LOCUS C5321 FROM CFT073 E.COLI STRAIN