SMTL ID : 4bxj.1

CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-tetramer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: A.60, G.61, F.62 Ligands: GOL.2 No protein-ligand interaction detected (PLIP) GOL.2: 5 residues within 4Å: Chain A: A.60, F.62 Chain B: S.8 Chain D: T.13 Ligands: GOL.1 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:T.13 GOL.3: 4 residues within 4Å: Chain A: Y.26, A.28, D.106, F.111 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.26, A:D.106 GOL.4: 4 residues within 4Å: Chain C: A.60, G.61, F.62 Ligands: GOL.5 No protein-ligand interaction detected (PLIP) GOL.5: 5 residues within 4Å: Chain B: T.13 Chain C: A.60, F.62 Chain D: S.8 Ligands: GOL.4 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.13 GOL.6: 4 residues within 4Å: Chain C: Y.26, A.28, D.106, F.111 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Y.26, C:Y.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, M. et al., Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa. J.Am.Chem.Soc. (2013)

Release Date

2013-10-09

Peptides

AMPDH3: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

AMPDH3

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