SMTL ID : 4c07.1

Crystal structure of M. musculus protein arginine methyltransferase PRMT6 with CaCl2 at 1.5 Angstroms

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

12 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: E.162, M.164, H.324, W.325 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.162, A:E.162, H2O.1, H2O.4, H2O.4 CA.2: 2 residues within 4Å: Chain A: H.170, E.171 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.171, H2O.4, H2O.10 CA.3: 3 residues within 4Å: Chain A: Q.246, D.247, K.326 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.247, H2O.6 CA.4: 1 residues within 4Å: Chain A: G.279 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:G.279, H2O.7, H2O.7, H2O.10, H2O.10 CA.5: 2 residues within 4Å: Chain A: R.259, F.260 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:R.259, H2O.7, H2O.7, H2O.10, H2O.10 CA.6: 2 residues within 4Å: Chain A: S.285, D.343 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.343, A:D.343, H2O.8, H2O.10 CA.7: 4 residues within 4Å: Chain B: E.162, M.164, H.324, W.325 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.162, B:E.162, H2O.11, H2O.14, H2O.14 CA.8: 2 residues within 4Å: Chain B: H.170, E.171 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.171, H2O.14, H2O.20 CA.9: 3 residues within 4Å: Chain B: Q.246, D.247, K.326 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.247, H2O.16 CA.10: 1 residues within 4Å: Chain B: G.279 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:G.279, H2O.17, H2O.17, H2O.20, H2O.20 CA.11: 2 residues within 4Å: Chain B: R.259, F.260 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:R.259, H2O.17, H2O.17, H2O.20, H2O.20 CA.12: 2 residues within 4Å: Chain B: S.285, D.343 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.343, B:D.343, H2O.18, H2O.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonnefond, L. et al., Functional Insights from High Resolution Structures of Mouse Protein Arginine Methyltransferase 6. J.Struct.Biol. (2015)

Release Date

2014-07-30

Peptides

PROTEIN ARGININE N-METHYLTRANSFERASE 6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROTEIN ARGININE N-METHYLTRANSFERASE 6

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