SMTL ID : 4c0s.1

Mammalian translation elongation factor eEF1A2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 14 residues within 4Å: Chain A: H.15, D.17, S.18, G.19, K.20, S.21, T.22, N.153, K.154, D.156, S.194, G.195, W.196 Ligands: MG.2 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:D.17, A:D.17, A:S.18, A:G.19, A:K.20, A:S.21, A:S.21, A:T.22, A:T.22, A:N.153, A:K.154, A:K.154, A:S.194, A:W.196 Water bridges: A:K.20, A:K.20 Salt bridges: A:K.20, A:D.156 pi-Cation interactions: A:K.154 GDP.3: 14 residues within 4Å: Chain B: H.15, D.17, S.18, G.19, K.20, S.21, T.22, N.153, K.154, D.156, S.194, G.195, W.196 Ligands: MG.4 17 PLIP interactions: 17 interactions with chain B Hydrogen bonds: B:H.15, B:D.17, B:S.18, B:G.19, B:K.20, B:S.21, B:S.21, B:T.22, B:T.22, B:N.153, B:K.154, B:K.154, B:G.195, B:W.196 Salt bridges: B:K.20, B:D.156 pi-Cation interactions: B:K.154

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.17 Ligands: GDP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.17 MG.4: 2 residues within 4Å: Chain B: D.17 Ligands: GDP.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crepin, T. et al., Mammalian Translation Elongation Factor Eef1A2: X-Ray Structure and New Features of Gdp/GTP Exchange Mechanism in Higher Eukaryotes. Nucleic Acids Res. (2014)

Release Date

2014-08-27

Peptides

ELONGATION FACTOR 1-ALPHA 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ELONGATION FACTOR 1-ALPHA 2

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