SMTL ID : 4c11.1

Dengue virus RNA dependent RNA polymerase with residues from the NS5 linker region

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.450, H.452, C.466, C.585 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.450, A:H.452, A:C.466, A:C.585 ZN.2: 4 residues within 4Å: Chain A: E.175, H.179, C.184, C.187 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.175, A:H.179, A:C.184, A:C.187 ZN.3: 4 residues within 4Å: Chain B: H.450, H.452, C.466, C.585 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.450, B:H.452, B:C.466, B:C.585 ZN.4: 4 residues within 4Å: Chain B: E.175, H.179, C.184, C.187 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.175, B:H.179, B:C.184, B:C.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lim, S.P. et al., A Crystal Structure of the Dengue Virus Ns5 Polymerase Delineates Inter-Domain Amino Acids Residues that Enhance its Thermostability and De Novo Initiation Activities. J.Biol.Chem. (2013)

Release Date

2013-08-21

Peptides

DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE: A
DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE

DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE