SMTL ID : 4c1a.2 (1 other biounit)

Coiled coil domain of the ZfL2-1 ORF1 protein from the zebrafish ZfL2- 1 retrotransposon

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: V.22, R.25, S.26, R.29 Ligands: GOL.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.22, A:R.25 GOL.2: 4 residues within 4Å: Chain A: V.22, R.25 Chain B: I.18 Ligands: GOL.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.25 GOL.3: 5 residues within 4Å: Chain B: V.22, R.25, S.26, R.29 Ligands: GOL.4 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.25, B:R.29 GOL.4: 4 residues within 4Å: Chain A: I.18 Chain B: V.22, R.25 Ligands: GOL.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schneider, A.M. et al., Structure and Properties of the Esterase from Non-Ltr Retrotransposons Suggest a Role for Lipids in Retrotransposition. Nucleic Acids Res. (2013)

Release Date

2013-09-11

Peptides

ORF1-ENCODED PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

ORF1-ENCODED PROTEIN

Related Entries With Identical Sequence