SMTL ID : 4c1s.2 (1 other biounit)

Glycoside hydrolase family 76 (mannosidase) Bt3792 from Bacteroides thetaiotaomicron VPI-5482

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 9 residues within 4Å: Chain A: L.288, A.289, P.290, G.291, A.293, N.296, D.340, D.341, D.342 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.291, A:N.296, A:D.341 Water bridges: A:A.293, A:L.343 EDO.2: 7 residues within 4Å: Chain A: C.26, W.27, Q.48, L.52, M.78, G.81, I.82 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.48, A:G.81 Water bridges: A:G.81, A:I.82 EDO.3: 6 residues within 4Å: Chain A: D.119, K.179, Q.243, R.301, E.305, R.366 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.179, A:Q.243, A:Q.243 Water bridges: A:Q.240 EDO.4: 4 residues within 4Å: Chain A: W.155, H.166, C.168, D.214 3 PLIP interactions: 3 interactions with chain A Water bridges: A:D.214, A:N.237, A:N.237

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 5 residues within 4Å: Chain A: W.46, F.106, D.108, D.109, W.155 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.108 Water bridges: A:D.109, A:D.109, A:D.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuskin, F. et al., Human Gut Bacteroidetes Can Utilize Yeast Mannan Through a Selfish Mechanism. Nature (2015)

Release Date

2013-11-13

Peptides

GLYCOSIDE HYDROLASE FAMILY 76 MANNOSIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

GLYCOSIDE HYDROLASE FAMILY 76 MANNOSIDASE

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