SMTL ID : 4c9j.1 (1 other biounit)

Structure of yeast mitochondrial ADP/ATP carrier isoform 3 inhibited by carboxyatractyloside (P212121 crystal form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

monomer

Ligands

1 x CXT: Carboxyatractyloside(Non-covalent)

CXT.1: 14 residues within 4Å: Chain A: R.100, N.108, K.112, S.145, G.203, I.204, Y.207, R.208, F.212, S.249, L.252, D.253, R.256, R.257 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.204, A:I.204, A:Y.207, A:Y.207, A:D.253 Hydrogen bonds: A:N.108, A:R.208, A:D.253, A:R.256, A:R.257 Salt bridges: A:R.100, A:K.112, A:K.112, A:R.208

3 x CDL: CARDIOLIPIN(Non-covalent)

CDL.2: 9 residues within 4Å: Chain A: W.91, R.92, G.93, N.94, T.95, V.98, G.176, L.177, T.178 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.91 Hydrogen bonds: A:G.93, A:T.95, A:T.95, A:T.95, A:L.177, A:T.178 CDL.3: 12 residues within 4Å: Chain A: I.55, S.72, G.73, I.74, V.75, F.289, G.291, C.292, G.293, A.294, I.296, L.297 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.289, A:F.289, A:F.289, A:I.296 Hydrogen bonds: A:I.74, A:V.75, A:G.291, A:C.292, A:G.293, A:A.294 CDL.4: 15 residues within 4Å: Chain A: L.147, I.190, A.191, Y.194, R.195, G.196, F.197, M.198, P.199, V.202, L.252, M.259, G.271, A.272, I.273 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.147, A:I.190, A:I.190, A:F.197, A:V.202, A:L.252 Hydrogen bonds: A:G.196, A:F.197, A:M.198, A:A.272, A:I.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruprecht, J.J. et al., Structures of Yeast Mitochondrial Adp/ATP Carriers Support a Domain-Based Alternating-Access Transport Mechanism. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-01-22

Peptides

ADP, ATP CARRIER PROTEIN 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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ADP, ATP CARRIER PROTEIN 3

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