- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.58 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 5 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 6 residues within 4Å:- Chain A: R.37, Y.39, T.127, R.128, S.155, H.157
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:R.128, A:S.155
- Water bridges: A:E.32, A:R.37, A:T.127, A:T.127, A:K.129, A:E.158
- Salt bridges: A:R.37
SO4.4: 1 residues within 4Å:- Chain A: H.157
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:H.157
SO4.5: 4 residues within 4Å:- Chain A: Q.64, H.65, K.66, S.67
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.66, A:S.67
- Water bridges: A:H.65
SO4.16: 3 residues within 4Å:- Chain B: E.182, N.183, G.184
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.183, B:N.183
- Water bridges: B:A.181, B:G.184
SO4.17: 6 residues within 4Å:- Chain B: R.37, Y.39, T.127, R.128, S.155, H.157
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:Y.39, B:Y.39, B:R.128, B:S.155
- Water bridges: B:K.129
- Salt bridges: B:R.37, B:R.128, B:H.157
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 12 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 4 residues within 4Å:- Chain A: E.158, G.159, I.160, A.161
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:I.160, A:A.161
- Water bridges: A:Q.123, A:T.162
GOL.8: 7 residues within 4Å:- Chain A: N.141, G.142, H.143, L.179, F.180, A.181, E.182
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:F.180, A:E.182
- Water bridges: A:H.143
GOL.9: 7 residues within 4Å:- Chain A: R.144, R.145, R.146
- Chain B: A.135, E.150, A.151, T.152
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Water bridges: A:G.142, A:R.144, A:R.146, B:T.152
GOL.10: 1 residues within 4Å:- Chain A: R.137
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.137, A:R.137
GOL.11: 3 residues within 4Å:- Chain A: E.74, C.97, F.98
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:F.98
- Water bridges: A:C.97, A:G.99
GOL.12: 4 residues within 4Å:- Chain A: T.81, V.89, D.90, W.91
2 PLIP interactions:2 interactions with chain A- Water bridges: A:D.90, A:D.90
GOL.19: 7 residues within 4Å:- Chain A: A.135, E.150, A.151, C.195
- Chain B: R.144, R.145, R.146
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Water bridges: B:R.144
- Hydrogen bonds: A:E.150
GOL.20: 7 residues within 4Å:- Chain B: N.141, G.142, H.143, L.179, F.180, A.181, E.182
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:H.143, B:A.181
- Water bridges: B:N.141, B:H.143, B:L.179, B:E.182
GOL.21: 5 residues within 4Å:- Chain B: P.42, Q.123, G.159, I.160, A.161
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:I.160, B:A.161
- Water bridges: B:Q.123, B:E.158, B:T.162
GOL.22: 5 residues within 4Å:- Chain B: F.100, Q.130, N.133, F.134, M.194
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.130, B:N.133
GOL.23: 5 residues within 4Å:- Chain B: C.43, Q.64, H.65, K.66, S.67
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:H.65, B:K.66, B:S.67, B:S.67
GOL.24: 6 residues within 4Å:- Chain B: N.5, S.6, V.7, F.9, P.23, H.24
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:V.7, B:H.24
- Water bridges: B:S.6, B:T.25
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rimsa, V. et al., Two High-Resolution Structures of the Human E3 Ubiquitin Ligase Siah1. Acta Crystallogr.,Sect.F (2013)
- Release Date
- 2013-10-16
- Peptides
- E3 UBIQUITIN-PROTEIN LIGASE SIAH1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.58 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 5 x SO4: SULFATE ION(Non-functional Binders)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 12 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rimsa, V. et al., Two High-Resolution Structures of the Human E3 Ubiquitin Ligase Siah1. Acta Crystallogr.,Sect.F (2013)
- Release Date
- 2013-10-16
- Peptides
- E3 UBIQUITIN-PROTEIN LIGASE SIAH1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B