SMTL ID : 4caw.1

Crystal structure of Aspergillus fumigatus N-myristoyl transferase in complex with myristoyl CoA and a pyrazole sulphonamide ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x P3U: 2,6-DICHLORO-4-(2-PIPERAZIN-1-YLPYRIDIN-4-YL)-N-(1,5-DIMETHYL,3-ISOBUTYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE(Non-covalent)

P3U.1: 20 residues within 4Å: Chain A: V.67, D.69, F.74, R.75, F.76, N.132, T.168, G.170, Y.182, H.184, F.197, S.297, V.308, Y.312, V.351, G.374, L.376, M.410, L.411 Ligands: MYA.2 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.67, A:D.69, A:F.74, A:F.76, A:F.76, A:F.197, A:F.197, A:V.308, A:V.351 Hydrogen bonds: A:G.170, A:S.297, A:G.374, A:L.411 Water bridges: A:N.132, A:D.373 pi-Stacking: A:Y.182 Halogen bonds: A:Y.312

1 x MYA: TETRADECANOYL-COA(Non-covalent)

MYA.2: 31 residues within 4Å: Chain A: H.65, Y.66, V.67, V.129, I.131, N.132, F.133, L.134, C.135, I.136, R.141, S.142, R.144, L.145, T.146, P.147, I.150, T.154, C.157, Y.158, I.162, Y.163, Q.164, A.165, Y.167, T.168, A.169, V.171, L.173, Y.381 Ligands: P3U.1 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:Y.66, A:V.67, A:V.129, A:I.131, A:I.131, A:L.134, A:L.134, A:L.134, A:I.136, A:I.150, A:I.150, A:Y.158, A:A.165, A:Y.167, A:Y.167, A:Y.167 Hydrogen bonds: A:Y.66, A:L.134, A:L.134, A:I.136, A:R.141, A:R.141, A:S.142, A:R.144, A:L.145, A:T.146, A:T.146 Salt bridges: A:R.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fang, W. et al., N-Myristoyltransferase is a Cell Wall Target in Aspergillus Fumigatus. Acs Chem.Biol. (2015)

Release Date

2014-09-17

Peptides

GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE

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