SMTL ID : 4cbs.1

X-ray structure of quintuple mutant of human alanine glyoxylate aminotransferase, AGXT_RHEAM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 14 residues within 4Å: Chain A: S.81, G.82, H.83, W.108, G.156, S.158, D.183, V.185, A.186, Q.208, K.209 Chain B: Y.260, H.262, T.263 15 PLIP interactions: 12 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:W.108, A:V.185, A:K.209 Hydrogen bonds: A:G.82, A:H.83, A:S.158, A:S.158, A:Q.208, A:Q.208, B:Y.260, B:T.263, B:T.263 Salt bridges: A:H.83, A:K.209 pi-Stacking: A:W.108 PLP.2: 14 residues within 4Å: Chain A: Y.260, H.262, T.263 Chain B: S.81, G.82, H.83, W.108, G.156, S.158, D.183, V.185, A.186, Q.208, K.209 14 PLIP interactions: 2 interactions with chain A, 12 interactions with chain B Hydrogen bonds: A:Y.260, A:T.263, B:G.82, B:H.83, B:S.158, B:S.158, B:Q.208, B:Q.208 Hydrophobic interactions: B:W.108, B:V.185, B:K.209 Salt bridges: B:H.83, B:K.209 pi-Stacking: B:W.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mesa-Torres, N. et al., The Consensus-Based Approach for Gene/Enzyme Replacement Therapies and Crystallization Strategies: The Case of Human Alanine:Glyoxylate Aminotransferase. Biochem.J. (2014)

Release Date

2014-07-09

Peptides

SERINE--PYRUVATE AMINOTRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

SERINE--PYRUVATE AMINOTRANSFERASE