SMTL ID : 4ccg.1 (1 other biounit)

Structure of an E2-E3 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.24, M.28 Chain B: Y.24 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: P.81, Q.82, I.83, R.84, R.99, I.100, L.105 Ligands: NA.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:P.81, A:I.83, A:I.83, A:I.100

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: P.80, P.81, Q.82, L.105 Ligands: GOL.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.105

2 x ZN: ZINC ION(Non-covalent)

ZN.4: 4 residues within 4Å: Chain B: C.20, C.23, H.47, C.50 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.20, B:C.23, B:H.47, B:C.50 ZN.5: 4 residues within 4Å: Chain B: C.37, C.42, C.72, C.75 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.37, B:C.42, B:C.72, B:C.75

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 4 residues within 4Å: Chain B: D.19, A.25, Y.26, Q.27 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.26, B:Q.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hodson, C. et al., Structure of the Human Fancl Ring-Ube2T Complex Reveals Determinants of Cognate E3-E2 Selection. Structure (2014)

Release Date

2014-01-08

Peptides

UBIQUITIN-CONJUGATING ENZYME E2 T: A
E3 UBIQUITIN-PROTEIN LIGASE FANCL: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
Y

UBIQUITIN-CONJUGATING ENZYME E2 T

E3 UBIQUITIN-PROTEIN LIGASE FANCL

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