SMTL ID : 4cd4.1

The structure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManIFG

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: Y.403, Q.404, S.405, V.408 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.405, A:V.408 NA.2: 5 residues within 4Å: Chain A: R.76, H.79, S.365, E.366, I.367 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.76

1 x BMA: beta-D-mannopyranose(Non-covalent)

BMA.3: 7 residues within 4Å: Chain A: D.130, H.156, W.167, W.373, R.374, Q.385 Ligands: IFM.4 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.130, A:W.373, A:R.374, A:Q.385, A:Q.385 Water bridges: A:D.130, A:D.130

1 x IFM: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE(Non-covalent)

IFM.4: 9 residues within 4Å: Chain A: H.156, W.167, E.221, F.227, Y.297, E.338, W.373, Q.385 Ligands: BMA.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.338, A:Q.385

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Williams, R.J. et al., Combined Inhibitor Free-Energy Landscape and Structural Analysis Reports on the Mannosidase Conformational Coordinate. Angew.Chem.Int.Ed.Engl. (2014)

Release Date

2014-04-02

Peptides

ENDO-1,4-BETA MANNANASE, PUTATIVE, MAN26C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ENDO-1,4-BETA MANNANASE, PUTATIVE, MAN26C

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