SMTL ID : 4cdg.1 (1 other biounit)

Crystal structure of the Bloom's syndrome helicase BLM in complex with Nanobody

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.79 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 15 residues within 4Å: Chain A: L.32, N.34, R.36, Q.39, P.57, T.58, G.59, G.60, G.61, K.62, S.63, L.64, R.349, N.609, D.631 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:N.34, A:R.36, A:R.36, A:R.36, A:Q.39, A:G.59, A:G.60, A:G.61, A:K.62, A:S.63, A:S.63, A:N.609 Salt bridges: A:K.62, A:R.349, A:R.349 pi-Cation interactions: A:R.36, A:R.36

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.403, C.422, C.430, C.433 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.403, A:C.422, A:C.430, A:C.433

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newman, J.A. et al., Crystal Structure of the Bloom'S Syndrome Helicase Indicates a Role for the Hrdc Domain in Conformational Changes. Nucleic Acids Res. (2015)

Release Date

2013-11-13

Peptides

BLOOM SYNDROME PROTEIN: A
NANOBODY: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

BLOOM SYNDROME PROTEIN

NANOBODY

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