SMTL ID : 4cdl.1

Crystal Structure of Retro-aldolase RA110.4-6 Complexed with Inhibitor 1-(6-methoxy-2-naphthalenyl)-1,3-butanedione

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x LLK: (2E)-1-(6-methoxynaphthalen-2-yl)but-2-en-1-one(Covalent)

LLK.1: 15 residues within 4Å: Chain A: I.38, E.39, S.40, P.41, F.42, Q.44, P.45, P.46, I.47, H.56, W.60, L.66, K.88, W.90, R.118 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.38, A:I.47, A:W.60, A:W.60, A:K.88, A:W.90 Hydrogen bonds: A:I.47, A:K.88, A:R.118 Water bridges: A:R.118 pi-Stacking: A:H.56, A:H.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Studer, S. et al., Active Site Plasticity of a Computationally Designed Retro-Aldolase Enzyme. To be Published

Release Date

2014-11-12

Peptides

STEROID DELTA-ISOMERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

STEROID DELTA-ISOMERASE