SMTL ID : 4cjz.1

Crystal structure of the integral membrane diacylglycerol kinase DgkA- 9.9, delta 4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

homo-trimer

Ligands

1 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.1: 15 residues within 4Å: Chain B: A.22, S.26 Chain C: A.39, Q.42, E.43, V.71, V.74, E.78, N.81, S.107, V.110, I.114, A.117, V.118, W.121 13 PLIP interactions: 12 interactions with chain C, 1 interactions with chain B Hydrophobic interactions: C:A.39, C:Q.42, C:E.43, C:V.71, C:V.74, C:I.114, C:A.117, C:V.118, C:W.121, C:W.121 Hydrogen bonds: C:E.78, C:S.107, B:S.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, D. et al., Crystal Structure of the Integral Membrane Diacylglycerol Kinase with Zn-Amppcp Bound and its Catalytic Mechanism. To be Published

Release Date

2015-01-28

Peptides

DIACYLGLYCEROL KINASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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DIACYLGLYCEROL KINASE

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