SMTL ID : 4cm0.1

Crystal structure of human soluble Adenylyl Cyclase with alpha,beta- methyleneadenosine-5'-triphosphate soaked with bicarbonate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-trimer

Ligands

3 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)

APC.1: 20 residues within 4Å: Chain A: D.47, I.48, S.49, G.50, F.51, T.52, A.97, G.98, D.99, K.144, F.336, T.405, V.406, V.411, N.412, A.415, R.416, K.451, G.452 Ligands: CA.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.49, A:G.50, A:F.51, A:T.52, A:T.52, A:K.144, A:R.176, A:T.405, A:N.412, A:R.416 APC.4: 20 residues within 4Å: Chain B: D.47, I.48, S.49, G.50, F.51, T.52, A.97, G.98, D.99, K.144, F.336, T.405, V.406, V.411, N.412, A.415, R.416, K.451, G.452 Ligands: CA.5 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:S.49, B:G.50, B:F.51, B:T.52, B:T.52, B:K.144, B:R.176, B:T.405, B:N.412, B:R.416 APC.7: 20 residues within 4Å: Chain C: D.47, I.48, S.49, G.50, F.51, T.52, A.97, G.98, D.99, K.144, F.336, T.405, V.406, V.411, N.412, A.415, R.416, K.451, G.452 Ligands: CA.8 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:S.49, C:G.50, C:F.51, C:T.52, C:T.52, C:K.144, C:R.176, C:T.405, C:N.412, C:R.416

3 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: D.47, I.48, D.99 Ligands: APC.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.47, A:D.99 CA.5: 4 residues within 4Å: Chain B: D.47, I.48, D.99 Ligands: APC.4 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.47, B:D.99 CA.8: 4 residues within 4Å: Chain C: D.47, I.48, D.99 Ligands: APC.7 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:D.47, C:D.99

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: K.95, L.166, V.167, F.336 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain B: K.95, L.166, V.167, F.336 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain C: K.95, L.166, V.167, F.336 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kleinboelting, S. et al., Crystal Structures of Human Soluble Adenylyl Cyclase Reveal Mechanisms of Catalysis and of its Activation Through Bicarbonate. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-03-05

Peptides

SOLUBLE ADENYLYL CYCLASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

SOLUBLE ADENYLYL CYCLASE