SMTL ID : 4cn7.2 (1 other biounit)

Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to an idealized DR1 Response Element

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.10, C.13, C.27, C.30 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.10, A:C.13, A:C.27, A:C.30 ZN.2: 4 residues within 4Å: Chain A: C.46, C.52, C.62, C.65 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.46, A:C.52, A:C.62, A:C.65 ZN.5: 4 residues within 4Å: Chain B: C.10, C.13, C.27, C.30 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.10, B:C.13, B:C.27, B:C.30 ZN.6: 4 residues within 4Å: Chain B: C.46, C.52, C.62, C.65 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.46, B:C.52, B:C.62, B:C.65

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: C.52, L.53, I.54, K.69 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: V.24, Y.25 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain B: Y.44, Y.64, Y.67, Q.68 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osz, J. et al., Structural Basis of Natural Promoter Recognition by the Retinoid X Nuclear Receptor. Sci.Rep. (2015)

Release Date

2015-02-18

Peptides

RETINOIC ACID RECEPTOR RXR-ALPHA: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RETINOIC ACID RECEPTOR RXR-ALPHA

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