SMTL ID : 4cpd.1 (1 other biounit)

Alcohol dehydrogenase TADH from Thermus sp. ATN1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.74 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.38, S.40, H.59, D.152 Ligands: NAD.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.38, A:H.59, A:D.152, H2O.1 ZN.2: 6 residues within 4Å: Chain A: C.89, G.90, C.92, C.95, C.103, E.104 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.89, A:C.92, A:C.95, A:C.103 ZN.4: 5 residues within 4Å: Chain B: C.38, S.40, H.59, D.152 Ligands: NAD.6 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:C.38, B:H.59, B:D.152, H2O.3 ZN.5: 6 residues within 4Å: Chain B: C.89, G.90, C.92, C.95, C.103, E.104 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.89, B:C.92, B:C.95, B:C.103

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.3: 24 residues within 4Å: Chain A: G.39, S.40, H.43, F.85, D.152, T.156, G.176, G.178, P.179, V.180, D.200, R.201, I.202, R.205, A.243, V.244, V.266, G.267, V.268, G.291, L.292, A.293, F.333 Ligands: ZN.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:T.156 Hydrogen bonds: A:G.39, A:H.43, A:V.180, A:R.205, A:R.205, A:V.244, A:V.266, A:V.268, A:A.293 Water bridges: A:G.178, A:G.178 Salt bridges: A:R.205 NAD.6: 22 residues within 4Å: Chain B: G.39, S.40, H.43, F.85, D.152, T.156, G.178, P.179, V.180, D.200, R.201, I.202, R.205, A.243, V.244, V.266, G.267, V.268, G.291, L.292, A.293 Ligands: ZN.4 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:T.156 Hydrogen bonds: B:G.39, B:H.43, B:V.180, B:R.205, B:R.205, B:V.244, B:V.266, B:V.268, B:A.293 Water bridges: B:G.178, B:G.178, B:R.201, B:R.205 Salt bridges: B:R.205 pi-Cation interactions: B:R.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Man, H. et al., Structure of the Nadh-Dependent Thermostable Alcohol Dehydrogenase Tadh from Thermus Sp. Atn1 Provides a Platform for Engineering Specificity and Improved Compatibility with Inorganic Cofactor-Regeneration Catalysts. J.Mol.Catal., B Enzym. (2014)

Release Date

2014-12-17

Peptides

ALCOHOL DEHYDROGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

ALCOHOL DEHYDROGENASE

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