SMTL ID : 4crn.1

Cryo-EM of a pretermination complex with eRF1 and eRF3

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 9.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Covalent)

GNP.1: 26 residues within 4Å: Chain A: H.13, V.14, D.15, A.16, G.17, K.18, S.19, T.20, Q.50, G.51, Y.53, K.62, K.69, T.70, I.71, D.89, A.90, P.91, G.92, H.93, K.94, N.151, K.152, D.155, S.193, G.194 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:G.17, A:K.18, A:S.19, A:S.19, A:S.19, A:S.19, A:T.20, A:T.20, A:Q.50, A:G.51, A:I.71, A:D.89, A:P.91, A:N.151, A:K.152, A:G.194 Salt bridges: A:K.62, A:D.155 pi-Stacking: A:Y.53, A:Y.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Preis, A. et al., Cryoelectron Microscopic Structures of Eukaryotic Translation Termination Complexes Containing Erf1-Erf3 or Erf1-Abce1. Cell Rep. (2014)

Release Date

2014-07-23

Peptides

ERF3 IN RIBOSOME BOUND ERF1-ERF3-GDPNP COMPLEX: A
ERF1 IN RIBOSOME-BOUND ERF1-ERF3-GDPNP COMPLEX: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

B
X

ERF3 IN RIBOSOME BOUND ERF1-ERF3-GDPNP COMPLEX

ERF1 IN RIBOSOME-BOUND ERF1-ERF3-GDPNP COMPLEX