SMTL ID : 4csf.2 (3 other biounits)

Structural insights into Toscana virus RNA encapsidation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-hexamer

Ligands

3 x U- G- U- G- U- U- U- C- U: RNA (5'-R(*UP*GP*UP*GP*UP*UP*UP*CP*UP)-3')(Non-covalent)

U-G-U-G-U-U-U-C-U.1: 36 residues within 4Å: Chain A: Y.32, F.35, G.70, N.71, K.72, G.100, N.101, P.102, S.110, R.111, P.132, P.153, M.179, F.182, T.185, I.186, N.187, P.188, R.191, T.201, F.202, K.204, P.205, M.207, A.208, A.209, S.211 Chain B: Y.32, N.101, K.204, P.205 Chain F: V.68, K.79, T.185, I.186, P.188 Protein-ligand interaction information (PLIP) not available U-G-U-G-U-U-U-C-U.2: 35 residues within 4Å: Chain B: V.68, K.79, T.185, I.186, P.188 Chain C: Y.32, F.35, G.70, N.71, K.72, G.100, N.101, P.102, S.110, R.111, P.132, P.153, M.179, F.182, T.185, I.186, P.188, R.191, T.201, F.202, K.204, P.205, M.207, A.208, A.209, S.211 Chain D: Y.32, N.101, K.204, P.205 Protein-ligand interaction information (PLIP) not available U-G-U-G-U-U-U-C-U.3: 37 residues within 4Å: Chain D: V.68, K.79, P.132, T.185, I.186, P.188 Chain E: Y.32, F.35, G.70, N.71, K.72, G.100, N.101, P.102, S.110, R.111, P.132, P.153, M.179, F.182, T.185, I.186, N.187, P.188, R.191, T.201, F.202, K.204, P.205, M.207, A.208, A.209, S.211 Chain F: Y.32, N.101, K.204, P.205 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Olal, D. et al., Structural Insights Into RNA Encapsidation and Helical Assembly of the Toscana Virus Nucleoprotein. Nucleic Acids Res. (2014)

Release Date

2014-04-09

Peptides

NUCLEOPROTEIN: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
M

B
N

C
O

D
P

E
Q

F
R

NUCLEOPROTEIN

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