SMTL ID : 4cvr.1

Structure of Apobacterioferritin Y25F variant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

homo-dimer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: E.85 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.85, H2O.4, H2O.4 ZN.2: 3 residues within 4Å: Chain A: H.29, E.45, D.91 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.29, A:E.45, A:D.91, A:D.91, H2O.2 ZN.3: 4 residues within 4Å: Chain A: E.19, E.52, H.55, E.128 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.19, A:E.19, A:E.52, A:H.55, A:E.128 ZN.4: 4 residues within 4Å: Chain A: E.52, E.95, E.128, H.131 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.95, A:E.95, A:E.128, A:H.131, H2O.3 ZN.5: 1 residues within 4Å: Chain B: E.85 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.85, H2O.12, H2O.12 ZN.6: 3 residues within 4Å: Chain B: H.29, E.45, D.91 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.29, B:E.45, B:D.91, B:D.91, H2O.9 ZN.7: 4 residues within 4Å: Chain B: E.19, E.52, H.55, E.128 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.19, B:E.19, B:E.52, B:H.55, B:E.128 ZN.8: 4 residues within 4Å: Chain B: E.52, E.95, E.128, H.131 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.95, B:E.95, B:E.128, B:H.131, H2O.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hingorani, K. et al., Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis. Biochim.Biophys.Acta (2014)

Release Date

2014-08-20

Peptides

BACTERIOFERRITIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

BACTERIOFERRITIN