SMTL ID : 4d99.1 (1 other biounit)

Salmonella typhimurium D-Cysteine desulfhydrase with L-ser bound non-covalently at the active site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-dimer

Ligands

2 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.1: 4 residues within 4Å: Chain A: Y.44, L.45, I.310, S.314 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.44, A:L.45, A:I.310 Hydrogen bonds: A:Y.44 BEN.3: 2 residues within 4Å: Chain B: Y.44, L.45 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:Y.44 Hydrogen bonds: B:L.45

2 x SER: SERINE(Non-covalent)

SER.2: 11 residues within 4Å: Chain A: K.65, A.87, G.88, A.89, S.92, N.93, H.94, V.172, G.173, Y.275, Y.301 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:A.89, A:S.92, A:S.92, A:N.93, A:H.94, A:H.94, A:G.173, A:Y.275 SER.4: 10 residues within 4Å: Chain B: K.65, A.87, G.88, S.92, N.93, H.94, V.172, G.173, Y.275, Y.301 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:A.87, B:S.92, B:N.93, B:N.93, B:H.94, B:G.173, B:Y.275, B:Y.275, B:Y.301

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bharath, S.R. et al., Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase. Plos One (2012)

Release Date

2012-05-30

Peptides

D-cysteine desulfhydrase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D-cysteine desulfhydrase

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